BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018G05LP1|AL427370
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1568 1634 0.0
>3x_Contig1568
Length = 12470
Score = 1634 bits (816), Expect = 0.0
Identities = 868/894 (97%)
Strand = Plus / Plus
Query: 19 gatccaaacgcagagtccccatacatatcatacctggacttcaactcaggatcgctaaga 78
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 415 gatccaaacgcagagtccccatacatatcatacctgttttttttctcaggatcgctaaga 474
Query: 79 atctcataggcagatgtcacctctttaaacatagcttcactagtctctctttcggcttca 138
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 475 atctcataggcagctgtcacctctttaaacataccttcactagtctctctttcggcttca 534
Query: 139 tcgatgattttgtccggatggtatttcaatgccagctttctatatgccttcctgatctcc 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tcgatgattttgtccggatggtatttcaatgccagctttctatatgccttcctgatctcc 594
Query: 199 acctcagtagcatccttctctactcctaacacatcgtatggggtctgtgccatgtcgtag 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acctcagtagcatccttctctactcctaacacatcgtatggggtctgtgccatgtcgtag 654
Query: 259 ttcacgttactgttggtcagcctggtacaacctattgctccttcttcatctacatgtcct 318
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 655 ttcacgttactgttggtcagcctggtacaacctattgctccttcatcatctacatgtcct 714
Query: 319 tcttgttcatactgctttttaaacatttgatatttccatatatgtrataccgaaaatcta 378
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 715 tcttgttcatactgctttttaaacatttgatatttccatatatgtaataccgaaaatcta 774
Query: 379 cctgtagtgaaaaatacataaggcttactgctgctaaatcgctccgaatatttaacattg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 cctgtagtgaaaaatacataaggcttactgctgctaaatcgctccgaatatttaacattg 834
Query: 439 araacggaatatgtcattttaagtatgaragtttggatttcaagatgcaacaaagaaaag 498
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 835 aaaacggaatatgtcattttaagtatgaaagtttggatttcaagatgcaacaaagaaaag 894
Query: 499 attaacagtgaacgatctataatatrrtgtraaggtggtgtaccaccttaatacttcaac 558
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 895 attaacagtgaacgatctataatataatgtaaaggtggtgtaccaccttaatacttcaac 954
Query: 559 aaatatatatatrtgtgtgtakrgbggkagcgaatcaatcgtgtcaacatacttatacgc 618
|||||||||||| | | | || | || | ||||||||||||||||||||||||||||||
Sbjct: 955 aaatatatatatatatatatatagtggtaacgaatcaatcgtgtcaacatacttatacgc 1014
Query: 619 aacatataaatcacgtgatccataatgacctatatacttttcccttgctgcattccagta 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 aacatataaatcacgtgatccataatgacctatatacttttcccttgctgcattccagta 1074
Query: 679 ttgagataaaagtaccataacgtgaaccgggtaacaaatatttcctgccctggcgttgcc 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 ttgagataaaagtaccataacgtgaaccgggtaacaaatatttcctgccctggcgttgcc 1134
Query: 739 ctttccctgaagcctccgcttgggcaacaccgttacaattgaragadatgagccagaacc 798
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 1135 ctttccctgaagcctccgcttgggcaacaccgttacaattgaaagaaatgagccagaacc 1194
Query: 799 gggagttattttaatcgcggcaccattctaatcagcgcctacgctcgcatcacatatctc 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gggagttattttaatcgcggcaccattctaatcagcgcctacgctcgcatcacatatctc 1254
Query: 859 gctcgttgtgtcgcttccaattgcagtatttcccttgccattgatatcaatatt 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gctcgttgtgtcgcttccaattgcagtatttcccttgccattgatatcaatatt 1308
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5994
Number of Sequences: 1807
Number of extensions: 5994
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)